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Abstract
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\n\nThere’s a whole world of microbes in our drinking water, mostly bacteria in various states. But we don’t really know that much about it. Our goal for this work was to really get to know the bacterial communities in tap water and bottled mineral water, since those are the main ways people get their drinking water these days. We looked at 11 tap water samples from different places and distribution systems, plus 10 brands of bottled natural mineral water. We used two methods: a) heterotrophic plate counts with MALDI-TOF MS for the culturable bacteria, and b) Illumina amplicon sequencing for all bacteria, including those we can’t grow in a lab. For the culturable bacteria, we isolated them on WPCA (ISO) agar at 22 ± 2 °C for 72 hours. We identified 2046 isolates using MALDI-TOF MS. We compared them to the Bruker Daltonics Library and our own custom “Drinking Water Library.” For the total bacteria, we pulled DNA from 6 liters of water and sent it for Illumina 16S rRNA sequencing of the v4 region. We saw big differences between mineral and tap water. Tap water mostly had Alphaproteobacteria, especially the genus Blastomonas, while mineral water had more Gammaproteobacteria. Acidovorax was the main genus in 3 of 7 mineral water brands. The bacterial communities in different mineral water brands were super diverse, each with its own unique fingerprint. Even the season when the water was bottled changed which species showed up, with some only appearing in one season. Among the culturable bacteria, Proteobacteria was the most common phylum, making up about 85% of the isolates. After that came Actinobacteria, Firmicutes, and Bacteroidetes. Proteobacteria also dominated in the Illumina sequencing, accounting for over 99% of the reads. These two methods gave us different results at various taxonomic levels, showing they can really help each other out when we study microbes in mineral water. MALDI-TOF MS looks like a great way to quickly identify heterotrophic bacteria for routine checks in the bottling industry. This study shows that using both MALDI-TOF MS and NGS helps us get a full picture of bacterial diversity in water people drink. Both methods are good for regular use in the water industry to keep water quality high.\n\n
\nKeywords: 16S rRNA sequencing; Drinking water; MALDI-TOF mass spectrometry; Microbiota; Mineral water; Tap water.\n\nhttps://pubmed.ncbi.nlm.nih.gov/32919261/\n\n
\nThe post Unravelling the composition of tap and mineral water microbiota: Divergences between next-generation sequencing techniques and culture-based methods appeared first on Facts About Water.\n\nSource: Water Feed\n
Related reading: Bottled aqua incognita: microbiota assembly and dissolved organic matter diversity in natural mineral waters, Understanding nitrate contamination based on the relationship between changes in groundwater levels and changes in water quality with precipitation fluctuations, Composition of Seawater.
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